Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912254.1_cds_XP_016462297.1_55539
CDS Infomation

[gene=LOC107785488] [db_xref=GeneID:107785488] [protein=transketolase, chloroplastic-like] [protein_id=XP_016462297.1] [location=join(43253..43735,44851..44941,45081..45186,45305..45587,45915..46063,46154..46307,46598..47557)] [gbkey=CDS]
Sequence

ATGGCTTCTTCTTCTTCTCTCACTCTTTCTCAAGCTATCCTCTCTCGTTCTGTCCCTCGC
CATGGCTCTGCCTCTTCTTCTCAACTTTCCCCTTCTTCTCTCACTTTTTCCGGACTTAAA
TCTAACCCCAATATCACCACCTCCCGCCGCCGTACTCCTCCCTCCTCCGCCGCTGTACGG
TCAACAGTGATTCGTGCCTCGGCTGCAACCGAAACCATAGAGAAAACTGAGACTGCGCTT
GTTGACAAATCTGTAAACACGATTCGATTTTTGGCTATTGATGCTGTTGAAAAGGCAAAT
TCGGGTCACCCCGGTTTGCCCATGGGTTGTGCTCCGATGGGTCATATATTGTACGATGAG
GTTATGAGGTATAACCCGAAAAACCCGTATTGGTTTAATCGGGATCGGTTTGTTCTATCA
GCTGGACATGGTTGTATGCTTCAGTATGCTTTGCTTCATCTAGCTGGCTATGATGCTGTC
AGGGAAGAGGACTTGAAGAGCTTCCGTCAGTGGGGAAGCAAAACCCCTGGACACCCTGAA
AACTTTGAGACACCTGGTGTTGAAGTCACCACCGGGCCTCTGGGACAAGGTATTGCCAAT
GCCGTCGGCTTGGCCCTTGCAGAGAAACACTTGGCTGCTCGTTTCAATAAGCCTGACGCT
GAGATTGTAGACCACTACACATATGTTATTCTCGGTGATGGTTGCCAGATGGAGGGTATT
TCACAAGAAGCTTGTTCCCTTGCCGGACACTGGGGACTTGGAAAGCTGATTGCTTTCTAT
GATGACAACCACATCTCAATTGATGGTGACACAGAAATCGCTTTCACCGAGGATGTTGGT
GCCCGTTTTGAGGCTCTTGGGTGGCACGTAATCTGGGTGAAGAACGGTAACACTGGTTAT
GATGAGATTCGTGCTGCTATTAAGGAAGCAAAAACTGTCACAGACAAACCCACTATGATC
AAGGTGACTACAACCATTGGTTTTGGCTCGCCCAACAAGGCAAACAGTTACAGTGTACAT
GGAAGTGCACTTGGAGCTAAGGAAGTAGAGGCCACCAGGAGTAACTTGGGATGGCCTTAT
GAGCCTTTCCATGTGCCTGAAGATGTCAAGAGCCATTGGAGTCGTCATGTTCCCGAGGGT
GCTGCTCTTGAAGCTGGGTGGAATACCAAGTTTGCTGAATATGAGAAGAAGTACCCAGAG
GAAGCTGCAGAACTCAAATCCATTACTACTGGTGAACTACCTGCTGGCTGGGAGAAAGCT
CTTCCTACCTACACACCTGAAAGTCCAGCGGATGCCACCAGAAACCTGTCCCAACAAAAC
CTGAATGCTCTTGCCAAGGTTCTTCCTGGTTTCCTTGGTGGTAGTGCTGATCTTGCCTCA
TCAAACATGACCCTCATGAAAATGTTTGGTGACTTCCAAAAGAACACCCCTGAGGAGCGT
AATTTAAGGTTTGGTGTCCGTGAACATGGTATGGGAGCCATATGTAATGGGATTGCTCTA
CACAGCCCTGGCTTGATTCCCTACTGTGCTACTTTCTTTGTGTTCACCGACTACATGAGA
GGAGCCATGAGAATTTCAGCCTTGTCTGAAGCTGGAGTTATTTATGTTATGACCCACGAT
TCTATTGGTCTAGGAGAAGATGGGCCTACCCATCAACCCATTGAGCACTTGGCAAGTTTC
CGTGCAATGCCCAACATTCTGATGTTCCGTCCAGCAGACGGCAATGAGACAGCAGGAGCT
TACAAGGTGGCTGTCCTCAAGAGGAAGACACCATCAATCCTTGCCCTCTCTCGGCAAAAG
TTGCCGCAACTTGCTGGAAGTTCTATTGAAGGAGCAGCAAAGGGCGGCTACATTTTATCA
GACAATTCTTCTGGCAACAAACCTGATGTCATTTTGATTGGTACTGGTTCAGAGTTAGAA
ATTGCTGTCAAGGCTGCTGATGAACTCAGGAAAGAAGGAAAGGCAGTGAGAGTTGTTTCC
TTTGTTTGTTGGGAGCTTTTCGAAGAACAATCAGCCGACTACAAAGAAAGTGTCCTTCCA
TCATCTGTTACAGCTAGAGTTAGCATTGAAGCTGGATCCACATTTGGGTGGGAGAAATAT
GTCGGATCAAAGGGGAAGGCCATCGGAATTGACAGATGGGGTGCCAGTGCCCCTGCTGGA
ATTATATACAAGGAGTACGGAATTACAGCAGAGGCTGTTATAGCTGCAGCAAAACAAGTT
TCTTAG

Peptide Sequence

PEP ID

XP_016462297.1
PEP Infomation

PREDICTED: transketolase, chloroplastic-like [Nicotiana tabacum]
Sequence

MASSSSLTLSQAILSRSVPRHGSASSSQLSPSSLTFSGLKSNPNITTSRRRTPPSSAAVR
STVIRASAATETIEKTETALVDKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDE
VMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDAVREEDLKSFRQWGSKTPGHPE
NFETPGVEVTTGPLGQGIANAVGLALAEKHLAARFNKPDAEIVDHYTYVILGDGCQMEGI
SQEACSLAGHWGLGKLIAFYDDNHISIDGDTEIAFTEDVGARFEALGWHVIWVKNGNTGY
DEIRAAIKEAKTVTDKPTMIKVTTTIGFGSPNKANSYSVHGSALGAKEVEATRSNLGWPY
EPFHVPEDVKSHWSRHVPEGAALEAGWNTKFAEYEKKYPEEAAELKSITTGELPAGWEKA
LPTYTPESPADATRNLSQQNLNALAKVLPGFLGGSADLASSNMTLMKMFGDFQKNTPEER
NLRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHD
SIGLGEDGPTHQPIEHLASFRAMPNILMFRPADGNETAGAYKVAVLKRKTPSILALSRQK
LPQLAGSSIEGAAKGGYILSDNSSGNKPDVILIGTGSELEIAVKAADELRKEGKAVRVVS
FVCWELFEEQSADYKESVLPSSVTARVSIEAGSTFGWEKYVGSKGKAIGIDRWGASAPAG
IIYKEYGITAEAVIAAAKQVS

Transcript Sequence

Gene sequence data has not been registered.